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1) Angela and Linderman are the ones who devised the plan of the bomb in the first place, and Peter was always the bomb.
Peter was NOT always the bomb. Future Hiro clearly states that he tried to stab Sylar, but he regenerated and blew up. So, Hiro goes back in time, tells past Peter, "Save the chearleader..." and Peter becomes the bomb and Nathan blames Sylar for it -- History number two aka Five Years Gone. History three is our current storyline: Nathan saves the world and flies Peter away. Angela and Linderman saw a tragedy that was going to happen no matter how much they tried to stop it (look at how everytime the time line changes that sucker still goes off. Time is hard to change and how much would that break your spirit after 30 years of it. They were taking advantage of a terrible situation. They had lost their hope.
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2) Most of the time she seems not to have the decision as if all of this was meant to be. As was spoiled and as we already saw in season two, she is tired, feels defeated and got only a little bit of strength back when she heard peter was alive. She also cared for Nathan and it's not true that she "send heidi away" with any type of "power" like a few on the boards are claiming only because she touched Heidi when she were asking if she can depend on her support or not.
Soo agree!
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It was guaranteed that peter will survive because of two things: Teds power doesn't affect himself and even if it would, Claires regeneration would save him.
It was his death that send Angela into more dispair and regret. Her actions had killed her son. And as much as she tried to cut her heart out, she just can't.
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3) In my opinion she is one that have seen it all from better to worse so far. As she already said in the final episode and through what she said through 2 seasons so far, you can see that she believed on Adams doings thinking for the good. However, after he turned out to be Evil, fooled her and the others in the company and tried to release the virus only that he can be a "God", she helped the others to stop him. She even tried to protect victoria (by resisting Matts attacks) which was one of the good ones.
It's almost like Adam was a cult like figure. Much like with Peter, he prayed on what they wanted to hear and took them in, made them believe in him soo much.
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As you can see all in all she is more good than evil but she got herself so deep involved in earlier years that got her paying for the rest of her life. If that's not hard and tiring I don't know what is.
It's tragic and gorgous and sad. She tried to do good only to have it all crumble and her entire family pay. You can see she was trying to save Claire from the madness she brought into her house.:
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As about her children, I think that the reason they weren't taken by the company was that she kept them away from there at the first place.
Additional, even if it's hard to believe by many, she loves her children.
I thinki this is very important to note. Look at Bob and Claire. One wonders if perhaps one of the reasons she was so hell bent on no one, even her children, knowing what they could do because perhaps it meant the company would come knocking on her door: for them to be company men, just like their father.
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Of course she had to make some hard decisions and willed to rather have her son peter dead instead of 93% of the worlds population but to be honest, I think no matter how much you love someone no matter if its your child or anyone else.
Kaito says you have to sometimes cut out your own heart. Angela has lived this life and learned, I'm sure, the hard way how her heart could get in her way. She knows that the bigger picture must be looked at. 93 percent of the world's population against her son's life. You have to choice the world. She knows what that virus can do. She knows after 30 years how things work. She has learned to do what Claire was too young to do: Kill Peter, the one person who understood her, to save the world. What she did was noble, not evil. Its the few times I'll say:Angela was right.
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If that person tries to destroy the whole world or at least helps doing it, it's unavoidable.
So as she told Matt: if you can't stop him (change his mind), you need to kill him (so everyone else can be safe). To me it's understandable no matter how hard it was for her to make this decision.
When it comes to Nathan, she was definately not the one involved with his killing.
Even she understood that it was unavoidable, she still suffered.
Yes! Yes! Angela is in the mob. The secrets run deep. She knows how this world works. Look how hard she worked to keep her secrets. She can understand why Nathan was killed, but she doesn't have to like it.